HL_4UG0_114
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGGGCCCAUAACCCA
- Length
- 15 nucleotides
- Bulged bases
- 4UG0|1|S6|C|34
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UG0_114 not in the Motif Atlas
- Homologous match to HL_2BTE_002
- Geometric discrepancy: 0.5704
- The information below is about HL_2BTE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|S6|U|28
4UG0|1|S6|G|29
4UG0|1|S6|G|30
4UG0|1|S6|G|31
4UG0|1|S6|C|32
4UG0|1|S6|C|33
4UG0|1|S6|C|34
4UG0|1|S6|A|35
4UG0|1|S6|U|36
4UG0|1|S6|A|37
4UG0|1|S6|A|38
4UG0|1|S6|C|39
4UG0|1|S6|C|40
4UG0|1|S6|C|41
4UG0|1|S6|A|42
Current chains
- Chain S6
- HUMAN INITIATOR MET-TRNA-I
Nearby chains
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SF
- 40S RIBOSOMAL PROTEIN S5
- Chain SO
- 40S RIBOSOMAL PROTEIN S14
- Chain Sc
- 40S RIBOSOMAL PROTEIN S28
Coloring options: