HL_4UG0_117
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGAGGUCUUGGGGCCGAAACGAUCUCAACCUAU
- Length
- 33 nucleotides
- Bulged bases
- 4UG0|1|L5|U|1754, 4UG0|1|L5|C|1755, 4UG0|1|L5|U|1756, 4UG0|1|L5|G|1760, 4UG0|1|L5|C|1762, 4UG0|1|L5|C|1763, 4UG0|1|L5|G|1764, 4UG0|1|L5|A|1767
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|L5|A|1749
4UG0|1|L5|G|1750
4UG0|1|L5|A|1751
4UG0|1|L5|G|1752
4UG0|1|L5|G|1753
4UG0|1|L5|U|1754
4UG0|1|L5|C|1755
4UG0|1|L5|U|1756
4UG0|1|L5|U|1757
4UG0|1|L5|G|1758
4UG0|1|L5|G|1759
4UG0|1|L5|G|1760
4UG0|1|L5|G|1761
4UG0|1|L5|C|1762
4UG0|1|L5|C|1763
4UG0|1|L5|G|1764
4UG0|1|L5|A|1765
4UG0|1|L5|A|1766
4UG0|1|L5|A|1767
4UG0|1|L5|C|1768
4UG0|1|L5|G|1769
4UG0|1|L5|A|1770
4UG0|1|L5|U|1771
4UG0|1|L5|C|1772
4UG0|1|L5|U|1773
4UG0|1|L5|C|1774
4UG0|1|L5|A|1775
4UG0|1|L5|A|1776
4UG0|1|L5|C|1777
4UG0|1|L5|C|1778
4UG0|1|L5|U|1779
4UG0|1|L5|A|1780
4UG0|1|L5|U|1781
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S RIBOSOMAL PROTEIN L5
- Chain LI
- 60S RIBOSOMAL PROTEIN L10-LIKE
- Chain SP
- 40S RIBOSOMAL PROTEIN S15
- Chain SS
- 40S RIBOSOMAL PROTEIN S18
Coloring options: