HL_4UG0_130
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAUGCUAACUAGUUACGCGACCCCCGAGCGGUCGGCGUCCCCCAACUUCUUAGAGG
- Length
- 56 nucleotides
- Bulged bases
- 4UG0|1|S2|U|1397, 4UG0|1|S2|C|1403, 4UG0|1|S2|U|1404, 4UG0|1|S2|C|1412, 4UG0|1|S2|C|1416, 4UG0|1|S2|C|1418, 4UG0|1|S2|C|1423, 4UG0|1|S2|G|1431, 4UG0|1|S2|C|1436, 4UG0|1|S2|C|1437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|S2|C|1395
4UG0|1|S2|A|1396
4UG0|1|S2|U|1397
4UG0|1|S2|G|1398
4UG0|1|S2|C|1399
4UG0|1|S2|U|1400
4UG0|1|S2|A|1401
4UG0|1|S2|A|1402
4UG0|1|S2|C|1403
4UG0|1|S2|U|1404
4UG0|1|S2|A|1405
4UG0|1|S2|G|1406
4UG0|1|S2|U|1407
4UG0|1|S2|U|1408
4UG0|1|S2|A|1409
4UG0|1|S2|C|1410
4UG0|1|S2|G|1411
4UG0|1|S2|C|1412
4UG0|1|S2|G|1413
4UG0|1|S2|A|1414
4UG0|1|S2|C|1415
4UG0|1|S2|C|1416
4UG0|1|S2|C|1417
4UG0|1|S2|C|1418
4UG0|1|S2|C|1419
4UG0|1|S2|G|1420
4UG0|1|S2|A|1421
4UG0|1|S2|G|1422
4UG0|1|S2|C|1423
4UG0|1|S2|G|1424
4UG0|1|S2|G|1425
4UG0|1|S2|U|1426
4UG0|1|S2|C|1427
4UG0|1|S2|G|1428
4UG0|1|S2|G|1429
4UG0|1|S2|C|1430
4UG0|1|S2|G|1431
4UG0|1|S2|U|1432
4UG0|1|S2|C|1433
4UG0|1|S2|C|1434
4UG0|1|S2|C|1435
4UG0|1|S2|C|1436
4UG0|1|S2|C|1437
4UG0|1|S2|A|1438
4UG0|1|S2|A|1439
4UG0|1|S2|C|1440
4UG0|1|S2|U|1441
4UG0|1|S2|U|1442
4UG0|1|S2|C|1443
4UG0|1|S2|U|1444
4UG0|1|S2|U|1445
4UG0|1|S2|A|1446
4UG0|1|S2|G|1447
4UG0|1|S2|A|1448
4UG0|1|S2|G|1449
4UG0|1|S2|G|1450
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- 40S RIBOSOMAL PROTEIN S3
- Chain SQ
- 40S RIBOSOMAL PROTEIN S16
- Chain SR
- 40S RIBOSOMAL PROTEIN S17-LIKE
- Chain ST
- 40S RIBOSOMAL PROTEIN S19
- Chain SU
- 40S RIBOSOMAL PROTEIN S20
- Chain Sg
- GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT BETA-2-LIKE 1
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