HL_4UG0_135
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGACAUGAGAGGUGUAGAAUAAGUGGGAGGCCCCCGGCGCCCCCCCGGUGUCCCCGCGAGGGGCCCGGGGCGGGGUCCGCCGGCCCUGCGGGCCGCCGGUGAAAUACCACUACUCUGAUCGUUU
- Length
- 124 nucleotides
- Bulged bases
- 4UG0|1|L5|G|3958, 4UG0|1|L5|U|3959, 4UG0|1|L5|A|3962, 4UG0|1|L5|A|3972, 4UG0|1|L5|C|3978, 4UG0|1|L5|C|3979, 4UG0|1|L5|G|3980, 4UG0|1|L5|G|3981, 4UG0|1|L5|C|3982, 4UG0|1|L5|G|3983, 4UG0|1|L5|C|3984, 4UG0|1|L5|C|3985, 4UG0|1|L5|C|3986, 4UG0|1|L5|C|3987, 4UG0|1|L5|C|3988, 4UG0|1|L5|C|3989, 4UG0|1|L5|C|3990, 4UG0|1|L5|G|3991, 4UG0|1|L5|G|3992, 4UG0|1|L5|U|3993, 4UG0|1|L5|G|3994, 4UG0|1|L5|U|3995, 4UG0|1|L5|C|3996, 4UG0|1|L5|C|3997, 4UG0|1|L5|C|3998, 4UG0|1|L5|C|3999, 4UG0|1|L5|G|4000, 4UG0|1|L5|C|4001, 4UG0|1|L5|G|4002, 4UG0|1|L5|A|4003, 4UG0|1|L5|G|4004, 4UG0|1|L5|G|4005, 4UG0|1|L5|G|4006, 4UG0|1|L5|G|4007, 4UG0|1|L5|C|4008, 4UG0|1|L5|C|4009, 4UG0|1|L5|C|4010, 4UG0|1|L5|G|4011, 4UG0|1|L5|G|4012, 4UG0|1|L5|G|4013, 4UG0|1|L5|G|4014, 4UG0|1|L5|C|4015, 4UG0|1|L5|G|4016, 4UG0|1|L5|G|4017, 4UG0|1|L5|G|4018, 4UG0|1|L5|G|4019, 4UG0|1|L5|U|4020, 4UG0|1|L5|C|4021, 4UG0|1|L5|C|4022, 4UG0|1|L5|G|4023, 4UG0|1|L5|C|4024, 4UG0|1|L5|C|4025, 4UG0|1|L5|G|4026, 4UG0|1|L5|G|4027, 4UG0|1|L5|C|4028, 4UG0|1|L5|C|4029, 4UG0|1|L5|C|4030, 4UG0|1|L5|U|4031, 4UG0|1|L5|G|4032, 4UG0|1|L5|C|4033, 4UG0|1|L5|G|4034, 4UG0|1|L5|G|4035, 4UG0|1|L5|G|4042, 4UG0|1|L5|G|4043, 4UG0|1|L5|U|4044, 4UG0|1|L5|G|4045, 4UG0|1|L5|A|4046, 4UG0|1|L5|A|4047, 4UG0|1|L5|U|4049, 4UG0|1|L5|A|4053, 4UG0|1|L5|C|4054, 4UG0|1|L5|U|4055, 4UG0|1|L5|C|4059, 4UG0|1|L5|U|4060
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|L5|A|3945
4UG0|1|L5|G|3946
4UG0|1|L5|A|3947
4UG0|1|L5|C|3948
4UG0|1|L5|A|3949
4UG0|1|L5|U|3950
4UG0|1|L5|G|3951
4UG0|1|L5|A|3952
4UG0|1|L5|G|3953
4UG0|1|L5|A|3954
4UG0|1|L5|G|3955
4UG0|1|L5|G|3956
4UG0|1|L5|U|3957
4UG0|1|L5|G|3958
4UG0|1|L5|U|3959
4UG0|1|L5|A|3960
4UG0|1|L5|G|3961
4UG0|1|L5|A|3962
4UG0|1|L5|A|3963
4UG0|1|L5|U|3964
4UG0|1|L5|A|3965
4UG0|1|L5|A|3966
4UG0|1|L5|G|3967
4UG0|1|L5|U|3968
4UG0|1|L5|G|3969
4UG0|1|L5|G|3970
4UG0|1|L5|G|3971
4UG0|1|L5|A|3972
4UG0|1|L5|G|3973
4UG0|1|L5|G|3974
4UG0|1|L5|C|3975
4UG0|1|L5|C|3976
4UG0|1|L5|C|3977
4UG0|1|L5|C|3978
4UG0|1|L5|C|3979
4UG0|1|L5|G|3980
4UG0|1|L5|G|3981
4UG0|1|L5|C|3982
4UG0|1|L5|G|3983
4UG0|1|L5|C|3984
4UG0|1|L5|C|3985
4UG0|1|L5|C|3986
4UG0|1|L5|C|3987
4UG0|1|L5|C|3988
4UG0|1|L5|C|3989
4UG0|1|L5|C|3990
4UG0|1|L5|G|3991
4UG0|1|L5|G|3992
4UG0|1|L5|U|3993
4UG0|1|L5|G|3994
4UG0|1|L5|U|3995
4UG0|1|L5|C|3996
4UG0|1|L5|C|3997
4UG0|1|L5|C|3998
4UG0|1|L5|C|3999
4UG0|1|L5|G|4000
4UG0|1|L5|C|4001
4UG0|1|L5|G|4002
4UG0|1|L5|A|4003
4UG0|1|L5|G|4004
4UG0|1|L5|G|4005
4UG0|1|L5|G|4006
4UG0|1|L5|G|4007
4UG0|1|L5|C|4008
4UG0|1|L5|C|4009
4UG0|1|L5|C|4010
4UG0|1|L5|G|4011
4UG0|1|L5|G|4012
4UG0|1|L5|G|4013
4UG0|1|L5|G|4014
4UG0|1|L5|C|4015
4UG0|1|L5|G|4016
4UG0|1|L5|G|4017
4UG0|1|L5|G|4018
4UG0|1|L5|G|4019
4UG0|1|L5|U|4020
4UG0|1|L5|C|4021
4UG0|1|L5|C|4022
4UG0|1|L5|G|4023
4UG0|1|L5|C|4024
4UG0|1|L5|C|4025
4UG0|1|L5|G|4026
4UG0|1|L5|G|4027
4UG0|1|L5|C|4028
4UG0|1|L5|C|4029
4UG0|1|L5|C|4030
4UG0|1|L5|U|4031
4UG0|1|L5|G|4032
4UG0|1|L5|C|4033
4UG0|1|L5|G|4034
4UG0|1|L5|G|4035
4UG0|1|L5|G|4036
4UG0|1|L5|C|4037
4UG0|1|L5|C|4038
4UG0|1|L5|G|4039
4UG0|1|L5|C|4040
4UG0|1|L5|C|4041
4UG0|1|L5|G|4042
4UG0|1|L5|G|4043
4UG0|1|L5|U|4044
4UG0|1|L5|G|4045
4UG0|1|L5|A|4046
4UG0|1|L5|A|4047
4UG0|1|L5|A|4048
4UG0|1|L5|U|4049
4UG0|1|L5|A|4050
4UG0|1|L5|C|4051
4UG0|1|L5|C|4052
4UG0|1|L5|A|4053
4UG0|1|L5|C|4054
4UG0|1|L5|U|4055
4UG0|1|L5|A|4056
4UG0|1|L5|C|4057
4UG0|1|L5|U|4058
4UG0|1|L5|C|4059
4UG0|1|L5|U|4060
4UG0|1|L5|G|4061
4UG0|1|L5|A|4062
4UG0|1|L5|U|4063
4UG0|1|L5|C|4064
4UG0|1|L5|G|4065
4UG0|1|L5|U|4066
4UG0|1|L5|U|4067
4UG0|1|L5|U|4068
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain Li
- 60S RIBOSOMAL PROTEIN L36
- Chain Lz
- 60S RIBOSOMAL PROTEIN L10A
- Chain S6
- Transfer RNA; tRNA
- Chain SB
- 40S RIBOSOMAL PROTEIN S3A
Coloring options: