HL_4UJC_004
3D structure
- PDB id
- 4UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CGCCCCGCGGGGCGCGG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJC|1|A2|C|126
4UJC|1|A2|G|127
4UJC|1|A2|C|128
4UJC|1|A2|C|129
4UJC|1|A2|C|130
4UJC|1|A2|C|131
4UJC|1|A2|G|132
4UJC|1|A2|C|133
4UJC|1|A2|G|134
4UJC|1|A2|G|135
4UJC|1|A2|G|136
4UJC|1|A2|G|137
4UJC|1|A2|C|138
4UJC|1|A2|G|139
4UJC|1|A2|C|140
4UJC|1|A2|G|141
4UJC|1|A2|G|142
Current chains
- Chain A2
- 28S RIBOSOMAL RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BG
- 60S RIBOSOMAL PROTEIN L7A
- Chain BN
- 60S RIBOSOMAL PROTEIN L15
- Chain BX
- 60S RIBOSOMAL PROTEIN L23A
- Chain Bh
- 60S RIBOSOMAL PROTEIN UL29
- Chain Bj
- 60S RIBOSOMAL PROTEIN L37
Coloring options: