HL_4UJC_092
3D structure
- PDB id
- 4UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CAGAUCAAAACCAACCCGUAG
- Length
- 21 nucleotides
- Bulged bases
- 4UJC|1|C1|G|225, 4UJC|1|C1|C|228
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJC|1|C1|C|223
4UJC|1|C1|A|224
4UJC|1|C1|G|225
4UJC|1|C1|A|226
4UJC|1|C1|U|227
4UJC|1|C1|C|228
4UJC|1|C1|A|229
4UJC|1|C1|A|230
4UJC|1|C1|A|231
4UJC|1|C1|A|232
4UJC|1|C1|C|233
4UJC|1|C1|C|234
4UJC|1|C1|A|235
4UJC|1|C1|A|236
4UJC|1|C1|C|237
4UJC|1|C1|C|238
4UJC|1|C1|C|239
4UJC|1|C1|G|240
4UJC|1|C1|U|296
4UJC|1|C1|A|297
4UJC|1|C1|G|298
Current chains
- Chain C1
- 18S RIBOSOMAL RNA
Nearby chains
- Chain CE
- 40S RIBOSOMAL PROTEIN ES4
- Chain CG
- 40S RIBOSOMAL PROTEIN ES6
- Chain CI
- 40S RIBOSOMAL PROTEIN ES8
- Chain CL
- 40S RIBOSOMAL PROTEIN US17
Coloring options: