HL_4UJC_132
3D structure
- PDB id
- 4UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- ACGAUCAGAUACCGU
- Length
- 15 nucleotides
- Bulged bases
- 4UJC|1|C1|U|1061
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJC|1|C1|A|1052
4UJC|1|C1|C|1053
4UJC|1|C1|G|1054
4UJC|1|C1|A|1055
4UJC|1|C1|U|1056
4UJC|1|C1|C|1057
4UJC|1|C1|A|1058
4UJC|1|C1|G|1059
4UJC|1|C1|A|1060
4UJC|1|C1|U|1061
4UJC|1|C1|A|1062
4UJC|1|C1|C|1063
4UJC|1|C1|C|1064
4UJC|1|C1|G|1065
4UJC|1|C1|U|1066
Current chains
- Chain C1
- 18S RIBOSOMAL RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- Transfer RNA; tRNA
- Chain AC
- Internal ribosome entry site; IRES
- Chain CO
- 40S RIBOSOMAL PROTEIN US11
Coloring options: