HL_4UJD_004
3D structure
- PDB id
- 4UJD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.9 Å
Loop
- Sequence
- CGCCCCGCGGGGCGCGG
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJD|1|A2|C|126
4UJD|1|A2|G|127
4UJD|1|A2|C|128
4UJD|1|A2|C|129
4UJD|1|A2|C|130
4UJD|1|A2|C|131
4UJD|1|A2|G|132
4UJD|1|A2|C|133
4UJD|1|A2|G|134
4UJD|1|A2|G|135
4UJD|1|A2|G|136
4UJD|1|A2|G|137
4UJD|1|A2|C|138
4UJD|1|A2|G|139
4UJD|1|A2|C|140
4UJD|1|A2|G|141
4UJD|1|A2|G|142
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AG
- 60S RIBOSOMAL PROTEIN L7A
- Chain AN
- 60S RIBOSOMAL PROTEIN L15
- Chain AX
- 60S RIBOSOMAL PROTEIN L23A
- Chain Ah
- 60S RIBOSOMAL PROTEIN L35
- Chain Aj
- 60S RIBOSOMAL PROTEIN L37
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