3D structure

PDB id
4UJE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Experimental method
ELECTRON MICROSCOPY
Resolution
6.9 Å

Loop

Sequence
CGCCCCGCGGGGCGCGG
Length
17 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UJE|1|A2|C|126
4UJE|1|A2|G|127
4UJE|1|A2|C|128
4UJE|1|A2|C|129
4UJE|1|A2|C|130
4UJE|1|A2|C|131
4UJE|1|A2|G|132
4UJE|1|A2|C|133
4UJE|1|A2|G|134
4UJE|1|A2|G|135
4UJE|1|A2|G|136
4UJE|1|A2|G|137
4UJE|1|A2|C|138
4UJE|1|A2|G|139
4UJE|1|A2|C|140
4UJE|1|A2|G|141
4UJE|1|A2|G|142

Current chains

Chain A2
28S Ribosomal RNA

Nearby chains

Chain A3
5.8S ribosomal RNA; 5.8S rRNA
Chain CG
60S RIBOSOMAL PROTEIN L7A
Chain CN
60S RIBOSOMAL PROTEIN L15
Chain CX
60S RIBOSOMAL PROTEIN L23A
Chain Ch
60S RIBOSOMAL PROTEIN L35
Chain Cj
60S RIBOSOMAL PROTEIN L37

Coloring options:

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