HL_4UJE_045

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GCUGGGUGCAGC

Length

12 nucleotides

Bulged bases

4UJE|1|A2|G|2880, 4UJE|1|A2|U|2881

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|G|2875
4UJE|1|A2|C|2876
4UJE|1|A2|U|2877
4UJE|1|A2|G|2878
4UJE|1|A2|G|2879
4UJE|1|A2|G|2880
4UJE|1|A2|U|2881
4UJE|1|A2|G|3566
4UJE|1|A2|C|3567
4UJE|1|A2|A|3568
4UJE|1|A2|G|3569
4UJE|1|A2|C|3570

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain BI

40S RIBOSOMAL PROTEIN S8

Chain BL

40S RIBOSOMAL PROTEIN S11

Chain CR

60S RIBOSOMAL PROTEIN L19