HL_4UJE_079
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UJE_079 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1647
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4UJE|1|AV|A|31
4UJE|1|AV|U|32
4UJE|1|AV|U|33
4UJE|1|AV|G|34
4UJE|1|AV|A|35
4UJE|1|AV|A|36
4UJE|1|AV|A|37
4UJE|1|AV|A|38
4UJE|1|AV|U|39
Current chains
- Chain AV
- TRNA-LYS
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain AW
- Transfer RNA; tRNA
- Chain AX
- Messenger RNA
- Chain B1
- Small subunit ribosomal RNA; SSU rRNA
- Chain BQ
- 40S RIBOSOMAL PROTEIN S16
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