HL_4UJE_098
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UGUUCAAAG
- Length
- 9 nucleotides
- Bulged bases
- 4UJE|1|B1|G|821
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UJE_098 not in the Motif Atlas
- Homologous match to HL_4V88_203
- Geometric discrepancy: 0.3489
- The information below is about HL_4V88_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47383.2
- Basepair signature
- cWW-F-F-cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
4UJE|1|B1|U|820
4UJE|1|B1|G|821
4UJE|1|B1|U|822
4UJE|1|B1|U|823
4UJE|1|B1|C|824
4UJE|1|B1|A|825
4UJE|1|B1|A|826
4UJE|1|B1|A|827
4UJE|1|B1|G|828
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BE
- 40S RIBOSOMAL PROTEIN S4, Y ISOFORM 1
- Chain BJ
- 40S RIBOSOMAL PROTEIN S9
- Chain BY
- 40S RIBOSOMAL PROTEIN S24
Coloring options: