HL_4UJE_114
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- AUUGCAAUUAUU
- Length
- 12 nucleotides
- Bulged bases
- 4UJE|1|B1|A|1623
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UJE_114 not in the Motif Atlas
- Homologous match to HL_8P9A_222
- Geometric discrepancy: 0.5384
- The information below is about HL_8P9A_222
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4UJE|1|B1|A|1614
4UJE|1|B1|U|1615
4UJE|1|B1|U|1616
4UJE|1|B1|G|1617
4UJE|1|B1|C|1618
4UJE|1|B1|A|1619
4UJE|1|B1|A|1620
4UJE|1|B1|U|1621
4UJE|1|B1|U|1622
4UJE|1|B1|A|1623
4UJE|1|B1|U|1624
4UJE|1|B1|U|1625
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BP
- 40S RIBOSOMAL PROTEIN S15
- Chain BS
- 40S RIBOSOMAL PROTEIN S18
- Chain BT
- 40S RIBOSOMAL PROTEIN S19
- Chain Bd
- 40S RIBOSOMAL PROTEIN S29
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