HL_4UJE_121

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UCGCACGAAA

Length

10 nucleotides

Bulged bases

4UJE|1|A2|C|1347, 4UJE|1|A2|C|1349

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|U|1344
4UJE|1|A2|C|1345
4UJE|1|A2|G|1346
4UJE|1|A2|C|1347
4UJE|1|A2|A|1348
4UJE|1|A2|C|1349
4UJE|1|A2|G|1350
4UJE|1|A2|A|1351
4UJE|1|A2|A|1352
4UJE|1|A2|A|1353

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain A3

5.8S ribosomal RNA; 5.8S rRNA

Chain CC

60S RIBOSOMAL PROTEIN L4

Chain CL

60S RIBOSOMAL PROTEIN L13

Chain CN

60S RIBOSOMAL PROTEIN L15

Chain CY

60S RIBOSOMAL PROTEIN L26