HL_4UJE_128

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

GUUAUUCCCAUGAC

Length

14 nucleotides

Bulged bases

4UJE|1|B1|U|1114, 4UJE|1|B1|U|1115, 4UJE|1|B1|C|1116

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|B1|G|1110
4UJE|1|B1|U|1111
4UJE|1|B1|U|1112
4UJE|1|B1|A|1113
4UJE|1|B1|U|1114
4UJE|1|B1|U|1115
4UJE|1|B1|C|1116
4UJE|1|B1|C|1117
4UJE|1|B1|C|1118
4UJE|1|B1|A|1119
4UJE|1|B1|U|1120
4UJE|1|B1|G|1121
4UJE|1|B1|A|1122
4UJE|1|B1|C|1123

Current chains

Chain B1

18S Ribosomal RNA

Nearby chains

Chain BA

40S RIBOSOMAL PROTEIN SA

Chain BB

40S RIBOSOMAL PROTEIN S3A

Chain Bb

40S RIBOSOMAL PROTEIN S27