HL_4UJE_139
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 4UJE|1|B1|A|886
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UJE_139 not in the Motif Atlas
- Homologous match to HL_8P9A_236
- Geometric discrepancy: 0.5576
- The information below is about HL_8P9A_236
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88364.4
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4UJE|1|B1|U|885
4UJE|1|B1|A|886
4UJE|1|B1|U|887
4UJE|1|B1|U|888
4UJE|1|B1|U|889
4UJE|1|B1|U|890
4UJE|1|B1|G|891
4UJE|1|B1|U|892
4UJE|1|B1|U|893
4UJE|1|B1|G|894
4UJE|1|B1|G|895
4UJE|1|B1|U|896
4UJE|1|B1|U|897
4UJE|1|B1|U|898
4UJE|1|B1|U|899
4UJE|1|B1|C|900
4UJE|1|B1|G|901
Current chains
- Chain B1
- 18S Ribosomal RNA
Nearby chains
- Chain BG
- 40S RIBOSOMAL PROTEIN S6
- Chain BI
- 40S RIBOSOMAL PROTEIN S8
- Chain BL
- 40S RIBOSOMAL PROTEIN S11
Coloring options: