HL_4UY8_028

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

4UY8|1|A|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_028 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.3626

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

4UY8|1|A|C|1064
4UY8|1|A|U|1065
4UY8|1|A|U|1066
4UY8|1|A|A|1067
4UY8|1|A|G|1068
4UY8|1|A|A|1069
4UY8|1|A|A|1070
4UY8|1|A|G|1071
4UY8|1|A|C|1072
4UY8|1|A|A|1073
4UY8|1|A|G|1074

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain I

50S RIBOSOMAL PROTEIN L11

Chain M

50S RIBOSOMAL PROTEIN L16