HL_4UY8_064

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_064 not in the Motif Atlas

Geometric match to HL_7RQB_064

Geometric discrepancy: 0.1215

The information below is about HL_7RQB_064

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4UY8|1|A|C|2658
4UY8|1|A|G|2659
4UY8|1|A|A|2660
4UY8|1|A|G|2661
4UY8|1|A|A|2662
4UY8|1|A|G|2663

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain G

50S RIBOSOMAL PROTEIN L6