HL_4UY8_068

3D structure

PDB id

4UY8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

4UY8|1|A|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4UY8_068 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0981

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4UY8|1|A|G|2819
4UY8|1|A|A|2820
4UY8|1|A|A|2821
4UY8|1|A|G|2822
4UY8|1|A|A|2823
4UY8|1|A|C|2824
4UY8|1|A|G|2825
4UY8|1|A|A|2826
4UY8|1|A|C|2827

Current chains

Chain A

RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain D

50S RIBOSOMAL PROTEIN L3

Chain N

50S RIBOSOMAL PROTEIN L17