HL_4UY8_076
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 4UY8|1|B|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4UY8_076 not in the Motif Atlas
- Homologous match to HL_5J7L_215
- Geometric discrepancy: 0.1076
- The information below is about HL_5J7L_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4UY8|1|B|A|34
4UY8|1|B|C|35
4UY8|1|B|C|36
4UY8|1|B|C|37
4UY8|1|B|C|38
4UY8|1|B|A|39
4UY8|1|B|U|40
4UY8|1|B|G|41
4UY8|1|B|C|42
4UY8|1|B|C|43
4UY8|1|B|G|44
4UY8|1|B|A|45
4UY8|1|B|A|46
4UY8|1|B|C|47
4UY8|1|B|U|48
Current chains
- Chain B
- RRNA-5S RIBOSOMAL RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S RIBOSOMAL PROTEIN L5
- Chain O
- 50S RIBOSOMAL PROTEIN L18
Coloring options: