Loop HL_4UY8

3D structure

PDB id: 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.8 Å

Loop

Sequence: CCUUGAUGGAAGUGUGGACGCCAGUCUGCAUGGCUUUAAUG
Length: 41 nucleotides
Bulged bases: 4UY8|1|A|G|2110, 4UY8|1|A|A|2134, 4UY8|1|A|A|2135, 4UY8|1|A|G|2136, 4UY8|1|A|U|2137, 4UY8|1|A|U|2139, 4UY8|1|A|G|2140, 4UY8|1|A|C|2143, 4UY8|1|A|G|2144, 4UY8|1|A|C|2145, 4UY8|1|A|C|2146, 4UY8|1|A|A|2147, 4UY8|1|A|G|2148, 4UY8|1|A|U|2149, 4UY8|1|A|C|2153, 4UY8|1|A|C|2179
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4UY8|1|A|C|2103
4UY8|1|A|C|2104
4UY8|1|A|U|2105
4UY8|1|A|U|2106
4UY8|1|A|G|2107
4UY8|1|A|A|2108
4UY8|1|A|U|2109
4UY8|1|A|G|2110
4UY8|1|A|G|2133
4UY8|1|A|A|2134
4UY8|1|A|A|2135
4UY8|1|A|G|2136
4UY8|1|A|U|2137
4UY8|1|A|G|2138
4UY8|1|A|U|2139
4UY8|1|A|G|2140
4UY8|1|A|G|2141
4UY8|1|A|A|2142
4UY8|1|A|C|2143
4UY8|1|A|G|2144
4UY8|1|A|C|2145
4UY8|1|A|C|2146
4UY8|1|A|A|2147
4UY8|1|A|G|2148
4UY8|1|A|U|2149
4UY8|1|A|C|2150
4UY8|1|A|U|2151
4UY8|1|A|G|2152
4UY8|1|A|C|2153
4UY8|1|A|A|2154
4UY8|1|A|U|2155
4UY8|1|A|G|2156
4UY8|1|A|G|2157
4UY8|1|A|C|2179
4UY8|1|A|U|2180
4UY8|1|A|U|2181
4UY8|1|A|U|2182
4UY8|1|A|A|2183
4UY8|1|A|A|2184
4UY8|1|A|U|2185
4UY8|1|A|G|2186

Current chains

Chain A: RRNA-23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

HL_4UY8_079