HL_4V19_005

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUUUGCAUAA

Length

10 nucleotides

Bulged bases

4V19|1|A|A|190

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73671.1

Basepair signature

cWW-R-R-tWH-R-R-R

Number of instances in this motif group

117

Unit IDs

4V19|1|A|U|182
4V19|1|A|U|183
4V19|1|A|U|184
4V19|1|A|U|185
4V19|1|A|G|186
4V19|1|A|C|187
4V19|1|A|A|188
4V19|1|A|U|189
4V19|1|A|A|190
4V19|1|A|A|191

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 5

MITORIBOSOMAL PROTEIN BL32M, MRPL32

Chain E

MITORIBOSOMAL PROTEIN UL3M, MRPL3

Chain P

MITORIBOSOMAL PROTEIN UL15M, MRPL15

Chain U

MITORIBOSOMAL PROTEIN BL20M, MRPL20

Chain V

MITORIBOSOMAL PROTEIN BL21M, MRPL21