HL_4V19_011

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AACCCUAAAU

Length

10 nucleotides

Bulged bases

4V19|1|A|C|403

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35255.1

Basepair signature

cWW-R-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

4V19|1|A|A|400
4V19|1|A|A|401
4V19|1|A|C|402
4V19|1|A|C|403
4V19|1|A|C|404
4V19|1|A|U|405
4V19|1|A|A|406
4V19|1|A|A|407
4V19|1|A|A|408
4V19|1|A|U|409

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 0

MITORIBOSOMAL PROTEIN BL27M, MRPL27

Chain 3

MITORIBOSOMAL PROTEIN UL30M, MRPL30

Chain Q

MITORIBOSOMAL PROTEIN UL16M, MRPL16