3D structure

PDB id
4V19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the large subunit of the mammalian mitoribosome, part 1 of 2
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CCUAAAAGCAG
Length
11 nucleotides
Bulged bases
4V19|1|A|A|513
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_03271.1
Basepair signature
cWW-R-R-R-tSH-R-R
Number of instances in this motif group
10

Unit IDs

4V19|1|A|C|507
4V19|1|A|C|508
4V19|1|A|U|509
4V19|1|A|A|510
4V19|1|A|A|511
4V19|1|A|A|512
4V19|1|A|A|513
4V19|1|A|G|514
4V19|1|A|C|515
4V19|1|A|A|516
4V19|1|A|G|517

Current chains

Chain A
MITORIBOSOMAL 16S RRNA

Nearby chains

Chain K
MITORIBOSOMAL PROTEIN UL11M, MRPL11
Chain Q
MITORIBOSOMAL PROTEIN UL16M, MRPL16

Coloring options:

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