HL_4V19_041

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCCU

Length

4 nucleotides

Bulged bases

4V19|1|A|C|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V19_041 not in the Motif Atlas

Geometric match to HL_8C3A_072

Geometric discrepancy: 0.2912

The information below is about HL_8C3A_072

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

4V19|1|A|G|652
4V19|1|A|C|653
4V19|1|A|C|654
4V19|1|A|U|655

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 5

MITORIBOSOMAL PROTEIN BL32M, MRPL32

Chain R

MITORIBOSOMAL PROTEIN BL17M, MRPL17