HL_4V19_043
3D structure
- PDB id
- 4V19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the large subunit of the mammalian mitoribosome, part 1 of 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- (P5P)(Y5P)(Y5P)(P5P)(P5P)(P5P)(P5P)(P5P)(Y5P)
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: P5P, Y5P
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V19_043 not in the Motif Atlas
- Geometric match to HL_8H1B_001
- Geometric discrepancy: 0.1995
- The information below is about HL_8H1B_001
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_10453.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
4V19|1|B|P5P|32
4V19|1|B|Y5P|33
4V19|1|B|Y5P|34
4V19|1|B|P5P|35
4V19|1|B|P5P|36
4V19|1|B|P5P|37
4V19|1|B|P5P|38
4V19|1|B|P5P|39
4V19|1|B|Y5P|40
Current chains
- Chain B
- MITORIBOSOMAL CP TRNA
Nearby chains
- Chain 0
- MITORIBOSOMAL PROTEIN BL27M, MRPL27
- Chain 4
- MITORIBOSOMAL PROTEIN BL31M, MRPL55
- Chain S
- MITORIBOSOMAL PROTEIN UL18M, MRPL18
Coloring options: