HL_4V49_018

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_018 not in the Motif Atlas

Geometric match to HL_4LFB_014

Geometric discrepancy: 0.0756

The information below is about HL_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V49|1|AA|G|840
4V49|1|AA|C|841
4V49|1|AA|U|842
4V49|1|AA|C|843
4V49|1|AA|A|844
4V49|1|AA|A|845
4V49|1|AA|C|846

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AF

30S ribosomal protein S6

Chain AR

30S ribosomal protein S18