3D structure

PDB id
4V49 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
8.7 Å

Loop

Sequence
CGUGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V49_024 not in the Motif Atlas
Homologous match to HL_4LFB_024
Geometric discrepancy: 0.0611
The information below is about HL_4LFB_024
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

4V49|1|AA|C|1076
4V49|1|AA|G|1077
4V49|1|AA|U|1078
4V49|1|AA|G|1079
4V49|1|AA|A|1080
4V49|1|AA|G|1081

Current chains

Chain AA
16S RIBOSOMAL RNA

Nearby chains

Chain AB
30S ribosomal protein S2
Chain AE
30S ribosomal protein S5

Coloring options:


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