HL_4V49_050

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GUUCGUGAAAC

Length

11 nucleotides

Bulged bases

4V49|1|B0|G|399, 4V49|1|B0|U|400

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_050 not in the Motif Atlas

Homologous match to HL_7A0S_013

Geometric discrepancy: 0.5206

The information below is about HL_7A0S_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V49|1|B0|G|395
4V49|1|B0|U|396
4V49|1|B0|U|397
4V49|1|B0|C|398
4V49|1|B0|G|399
4V49|1|B0|U|400
4V49|1|B0|G|401
4V49|1|B0|A|402
4V49|1|B0|A|403
4V49|1|B0|A|404
4V49|1|B0|C|405

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BY

50S ribosomal protein L31