HL_4V49_064

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

AGCUAACU

Length

8 nucleotides

Bulged bases

4V49|1|B0|C|968, 4V49|1|B0|U|969, 4V49|1|B0|C|972

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_064 not in the Motif Atlas

Homologous match to HL_7A0S_026

Geometric discrepancy: 0.4045

The information below is about HL_7A0S_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V49|1|B0|A|966
4V49|1|B0|G|967
4V49|1|B0|C|968
4V49|1|B0|U|969
4V49|1|B0|A|970
4V49|1|B0|A|971
4V49|1|B0|C|972
4V49|1|B0|U|973

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B9

5S ribosomal RNA; 5S rRNA

Chain BK

50S ribosomal protein L16