HL_4V49_094

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

4V49|1|B0|U|2385

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_094 not in the Motif Atlas

Homologous match to HL_4WF9_055

Geometric discrepancy: 0.1988

The information below is about HL_4WF9_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

4V49|1|B0|C|2383
4V49|1|B0|G|2384
4V49|1|B0|U|2385
4V49|1|B0|G|2386
4V49|1|B0|U|2387
4V49|1|B0|G|2388
4V49|1|B0|G|2389
4V49|1|B0|A|2390
4V49|1|B0|A|2391
4V49|1|B0|G|2392

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BJ

50S ribosomal protein L15