HL_4V49_103

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

4V49|1|B0|A|2795

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_103 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.1676

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V49|1|B0|G|2794
4V49|1|B0|A|2795
4V49|1|B0|A|2796
4V49|1|B0|G|2797
4V49|1|B0|A|2798
4V49|1|B0|C|2799
4V49|1|B0|C|2800
4V49|1|B0|A|2801
4V49|1|B0|C|2802

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BB

50S ribosomal protein L3

Chain BL

50S ribosomal protein L17

Chain BN

50S ribosomal protein L19