HL_4V49_105

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

4V49|1|B0|A|3146

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V49_105 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.203

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4V49|1|B0|C|3142
4V49|1|B0|U|3143
4V49|1|B0|A|3146
4V49|1|B0|C|3147
4V49|1|B0|G|3148
4V49|1|B0|G|3149

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains