HL_4V4A_044

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GUUCGUGAAAC

Length

11 nucleotides

Bulged bases

4V4A|1|B0|G|399, 4V4A|1|B0|U|400

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_044 not in the Motif Atlas

Homologous match to HL_7A0S_013

Geometric discrepancy: 0.5206

The information below is about HL_7A0S_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V4A|1|B0|G|395
4V4A|1|B0|U|396
4V4A|1|B0|U|397
4V4A|1|B0|C|398
4V4A|1|B0|G|399
4V4A|1|B0|U|400
4V4A|1|B0|G|401
4V4A|1|B0|A|402
4V4A|1|B0|A|403
4V4A|1|B0|A|404
4V4A|1|B0|C|405

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BY

50S ribosomal protein L31