Valid loops

No loops found

Problematic loops

#loop idProblemSequence
HL_4V4A_001No text annotation
HL_4V4A_002No text annotation
HL_4V4A_003GNRA
HL_4V4A_004GNRA
HL_4V4A_005UNCG
HL_4V4A_006GNRA related
HL_4V4A_007GNRA
HL_4V4A_008No text annotation
HL_4V4A_009UNCG
HL_4V4A_010GNRA
HL_4V4A_011UNCG
HL_4V4A_012GNRA related
HL_4V4A_013Mini UNCG
HL_4V4A_014No text annotation
HL_4V4A_015No text annotation
HL_4V4A_016GNRA
HL_4V4A_017No text annotation
HL_4V4A_018No text annotation
HL_4V4A_019GNRA
HL_4V4A_020GNRA
HL_4V4A_021No text annotation
HL_4V4A_022GNRA
HL_4V4A_023UNCG
HL_4V4A_024GNRA
HL_4V4A_025T-loop related
HL_4V4A_026No text annotation
HL_4V4A_027GNRA
HL_4V4A_028GNRA
HL_4V4A_029T-loop with 3 stacked bulged bases
HL_4V4A_030No text annotation
HL_4V4A_031UNCG
HL_4V4A_032GNRA
HL_4V4A_033No text annotation
HL_4V4A_108No text annotation
HL_4V4A_034No text annotation
HL_4V4A_035No text annotation
HL_4V4A_036No text annotation
HL_4V4A_037No text annotation
HL_4V4A_038No text annotation
HL_4V4A_039No text annotation
HL_4V4A_040No text annotation
HL_4V4A_041T-loop with 1 bulged base
HL_4V4A_042No text annotation
HL_4V4A_043T-loop with unstacked turn
HL_4V4A_044No text annotation
HL_4V4A_109No text annotation
HL_4V4A_045Pseudoknot geometry
HL_4V4A_046GNRA
HL_4V4A_047GNRA
HL_4V4A_048No text annotation
HL_4V4A_049T-loop with 2 bulged bases not stacked
HL_4V4A_050No text annotation
HL_4V4A_110No text annotation
HL_4V4A_051GNRA
HL_4V4A_103No text annotation
HL_4V4A_052No text annotation
HL_4V4A_053No text annotation
HL_4V4A_054No text annotation
HL_4V4A_055No text annotation
HL_4V4A_056No text annotation
HL_4V4A_057No text annotation
HL_4V4A_058GNRA
HL_4V4A_059No text annotation
HL_4V4A_060No text annotation
HL_4V4A_104No text annotation
HL_4V4A_061GNRA wlth tandem sheared
HL_4V4A_062No text annotation
HL_4V4A_063GNRA
HL_4V4A_105No text annotation
HL_4V4A_064T-loop with 2 stacked bulged bases
HL_4V4A_065Pseudoknot geometry with 3' bulge
HL_4V4A_066GNRA
HL_4V4A_067No text annotation
HL_4V4A_111No text annotation
HL_4V4A_106No text annotation
HL_4V4A_068Pseudoknot
HL_4V4A_069No text annotation
HL_4V4A_070No text annotation
HL_4V4A_071No text annotation
HL_4V4A_072No text annotation
HL_4V4A_073No text annotation
HL_4V4A_074No text annotation
HL_4V4A_075No text annotation
HL_4V4A_076No text annotation
HL_4V4A_077GNRA related
HL_4V4A_078No text annotation
HL_4V4A_079No text annotation
HL_4V4A_080No text annotation
HL_4V4A_112No text annotation
HL_4V4A_081No text annotation
HL_4V4A_082No text annotation
HL_4V4A_083No text annotation
HL_4V4A_084No text annotation
HL_4V4A_085Pseudoknot geometry
HL_4V4A_086GNRA with extra cWW
HL_4V4A_087GNRA
HL_4V4A_088No text annotation
HL_4V4A_089No text annotation
HL_4V4A_090tRNA anticodon loop
HL_4V4A_091No text annotation
HL_4V4A_092GNRA
HL_4V4A_107No text annotation
HL_4V4A_093GNRA
HL_4V4A_094Ribsomal LSU H95
HL_4V4A_095No text annotation
HL_4V4A_096No text annotation
HL_4V4A_097No text annotation
HL_4V4A_098GNRA
HL_4V4A_099UNCG
HL_4V4A_100GNRA
HL_4V4A_101No text annotation
HL_4V4A_113No text annotation
HL_4V4A_102GNRA

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
IL_4V4A_001Single bulged G
IL_4V4A_002Single bulged A
IL_4V4A_003No text annotation
IL_4V4A_004Minor groove platform
IL_4V4A_005Multiple bulged bases
IL_4V4A_006Isolated non-canonical cWW pair
IL_4V4A_007Major groove minor groove platform; mini C-loop
IL_4V4A_008Minor groove platform
IL_4V4A_009No text annotation
IL_4V4A_010tWH-tWH-tHW-tHW
IL_4V4A_011No text annotation
IL_4V4A_012Kink-turn with non-sequential stacking
IL_4V4A_013No text annotation
IL_4V4A_170No text annotation
IL_4V4A_014C-loop
IL_4V4A_015Single bulged U
IL_4V4A_016C-loop
IL_4V4A_017Single bulged G
IL_4V4A_018No text annotation
IL_4V4A_0196x5 Sarcin-Ricin; G-bulge
IL_4V4A_020No text annotation
IL_4V4A_021SSU/LSU pseudoknot
IL_4V4A_022Kink-turn related
IL_4V4A_023No text annotation
IL_4V4A_024tSH-tHW-tHS
IL_4V4A_025Major groove platform
IL_4V4A_026Major groove minor groove platform; mini C-loop
IL_4V4A_027No text annotation
IL_4V4A_028Major groove platform; stack outside cWW
IL_4V4A_029Major groove platform
IL_4V4A_030Tandem non-canonical cWW pairs
IL_4V4A_171Triple non-canonical cWW pairs
IL_4V4A_031No text annotation
IL_4V4A_032Kink-turn
IL_4V4A_033Left turn
IL_4V4A_034tSH-tHW-tHS
IL_4V4A_0358x6 Sarcin-Ricin with inserted Y; G-bulge
IL_4V4A_036Single bulged A
IL_4V4A_037Single bulged G
IL_4V4A_038Minor groove platform
IL_4V4A_039Minor groove platform
IL_4V4A_040No text annotation
IL_4V4A_041Single bulged U
IL_4V4A_042Isolated cWS basepair
IL_4V4A_043Minor groove platform
IL_4V4A_044Single bulged U
IL_4V4A_045Isolated non-canonical cWW pair
IL_4V4A_046No text annotation
IL_4V4A_172No text annotation
IL_4V4A_047Minor groove platform
IL_4V4A_048No text annotation
IL_4V4A_049No text annotation
IL_4V4A_050Not an internal loop
IL_4V4A_173Double sheared
IL_4V4A_051Minor groove platform
IL_4V4A_052No text annotation
IL_4V4A_053No text annotation
IL_4V4A_054No text annotation
IL_4V4A_055Isolated non-canonical cWW pair
IL_4V4A_056No text annotation
IL_4V4A_174No text annotation
IL_4V4A_057Isolated non-canonical cWW pair
IL_4V4A_058Double sheared
IL_4V4A_059UAA/GAN variation
IL_4V4A_060Isolated non-canonical cWW pair
IL_4V4A_061No text annotation
IL_4V4A_175No text annotation
IL_4V4A_062Double sheared
IL_4V4A_063Triple sheared with non-canonical cWW
IL_4V4A_064Single bulged A
IL_4V4A_065Minor groove platform
IL_4V4A_066Kink-turn
IL_4V4A_067Single stack bend
IL_4V4A_0688x7 Sarcin-Ricin; G-bulge
IL_4V4A_0698x7 Sarcin-Ricin; G-bulge
IL_4V4A_195No text annotation
IL_4V4A_070No text annotation
IL_4V4A_176No text annotation
IL_4V4A_071No text annotation
IL_4V4A_177Isolated non-canonical cWW pair
IL_4V4A_072Isolated non-canonical cWW pair
IL_4V4A_073Single bulged A
IL_4V4A_074No text annotation
IL_4V4A_075Isolated non-canonical cWW pair
IL_4V4A_076tHW-tHW cross-strand stack
IL_4V4A_077Triple sheared with non-canonical cWW
IL_4V4A_078No text annotation
IL_4V4A_178No text annotation
IL_4V4A_079Isolated non-canonical cWW pair
IL_4V4A_080Single stack bend
IL_4V4A_081Isolated non-canonical cWW with bulges
IL_4V4A_179Major groove platform; stack outside cWW
IL_4V4A_082No text annotation
IL_4V4A_083Single stack bend
IL_4V4A_084Isolated non-canonical cWW pair
IL_4V4A_0855x5 Sarcin-Ricin with intercalated A; G-bulge
IL_4V4A_1965x5 Sarcin-Ricin with intercalated A; G-bulge
IL_4V4A_086No text annotation
IL_4V4A_087C-loop
IL_4V4A_088Isolated near basepair
IL_4V4A_089No text annotation
IL_4V4A_090Isolated non-canonical cWW pair
IL_4V4A_091Single bulged C
IL_4V4A_092UAA/GAN
IL_4V4A_093Multiple bulged bases
IL_4V4A_094Single bulged U
IL_4V4A_095Kink-turn related
IL_4V4A_096No text annotation
IL_4V4A_097Isolated non-canonical cWW pair
IL_4V4A_180No text annotation
IL_4V4A_098No text annotation
IL_4V4A_099No text annotation
IL_4V4A_100No text annotation
IL_4V4A_101Isolated cWS basepair
IL_4V4A_102Isolated non-canonical cWW pair
IL_4V4A_181No text annotation
IL_4V4A_103Kink-turn
IL_4V4A_104No text annotation
IL_4V4A_197Intercalated cWW
IL_4V4A_1058x7 Sarcin-Ricin; G-bulge
IL_4V4A_106C-loop
IL_4V4A_107UAA/GAN
IL_4V4A_182No text annotation
IL_4V4A_108tSH-tHW-tHS
IL_4V4A_109Kink-turn
IL_4V4A_110No text annotation
IL_4V4A_183No text annotation
IL_4V4A_111No text annotation
IL_4V4A_112tSH-tHW
IL_4V4A_113Single stack bend
IL_4V4A_114Single bulged C
IL_4V4A_184No text annotation
IL_4V4A_115No text annotation
IL_4V4A_116No text annotation
IL_4V4A_198No text annotation
IL_4V4A_117No text annotation
IL_4V4A_118No text annotation
IL_4V4A_119No text annotation
IL_4V4A_185No text annotation
IL_4V4A_120No text annotation
IL_4V4A_121Major groove platform; stack outside cWW
IL_4V4A_186No text annotation
IL_4V4A_122Intercalated tWH
IL_4V4A_123tSH-tSH-tHH-tHS
IL_4V4A_124Isolated non-canonical cWW pair
IL_4V4A_125Kink-turn related
IL_4V4A_126Minor groove platform, major groove intercalation
IL_4V4A_187Major groove intercalation
IL_4V4A_127Isolated non-canonical cWW with bulges
IL_4V4A_128Major groove minor groove platform; mini C-loop
IL_4V4A_129No text annotation
IL_4V4A_188No text annotation
IL_4V4A_130Triple sheared
IL_4V4A_189UAA/GAN variation
IL_4V4A_190No text annotation
IL_4V4A_131No text annotation
IL_4V4A_199Major groove platform
IL_4V4A_132No text annotation
IL_4V4A_133No text annotation
IL_4V4A_200No text annotation
IL_4V4A_134Single bulged U
IL_4V4A_135Minor groove platform
IL_4V4A_136Isolated tHS basepair with bulges
IL_4V4A_137Isolated non-canonical cWW pair
IL_4V4A_138No text annotation
IL_4V4A_191No text annotation
IL_4V4A_139Double sheared
IL_4V4A_140Isolated non-canonical cWW pair
IL_4V4A_201Major groove platform
IL_4V4A_141Single stack bend
IL_4V4A_142Major groove platform
IL_4V4A_143Major groove platform with extra pair
IL_4V4A_192Major groove platform
IL_4V4A_144Major groove platform with extra cWW
IL_4V4A_145Triple sheared
IL_4V4A_146Major groove platform
IL_4V4A_147Isolated non-canonical cWW with bulges
IL_4V4A_148Multiple bulged bases
IL_4V4A_149No text annotation
IL_4V4A_193Major groove platform with intercalation
IL_4V4A_150Single bulged A
IL_4V4A_151tSH-tHS-tHW
IL_4V4A_152Sarcin-Ricin target in LSU H95; G-bulge
IL_4V4A_202C-loop
IL_4V4A_194No text annotation
IL_4V4A_153No text annotation
IL_4V4A_154No text annotation
IL_4V4A_155Multiple bulged bases
IL_4V4A_156UAA/GAN with extra cWW
IL_4V4A_157Major groove intercalation
IL_4V4A_158Decoding loop related
IL_4V4A_159No text annotation
IL_4V4A_160Other IL
IL_4V4A_161No text annotation
IL_4V4A_162No text annotation
IL_4V4A_163No text annotation
IL_4V4A_164Kink-turn
IL_4V4A_165Isolated non-canonical cWW with bulges
IL_4V4A_166No text annotation
IL_4V4A_167Major groove intercalation
IL_4V4A_168No text annotation
IL_4V4A_169Isolated non-canonical cWW pair

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
J3_4V4A_001No text annotation
J3_4V4A_024No text annotation
J3_4V4A_002No text annotation
J3_4V4A_025No text annotation
J3_4V4A_003No text annotation
J3_4V4A_004No text annotation
J3_4V4A_026No text annotation
J3_4V4A_005No text annotation
J3_4V4A_006No text annotation
J3_4V4A_007No text annotation
J3_4V4A_027No text annotation
J3_4V4A_028No text annotation
J3_4V4A_008No text annotation
J3_4V4A_009No text annotation
J3_4V4A_029No text annotation
J3_4V4A_010No text annotation
J3_4V4A_011No text annotation
J3_4V4A_012No text annotation
J3_4V4A_030No text annotation
J3_4V4A_031No text annotation
J3_4V4A_032No text annotation
J3_4V4A_013No text annotation
J3_4V4A_014No text annotation
J3_4V4A_015No text annotation
J3_4V4A_016No text annotation
J3_4V4A_036No text annotation
J3_4V4A_017No text annotation
J3_4V4A_018No text annotation
J3_4V4A_019No text annotation
J3_4V4A_033No text annotation
J3_4V4A_034No text annotation
J3_4V4A_035No text annotation
J3_4V4A_020No text annotation
J3_4V4A_021No text annotation
J3_4V4A_022No text annotation
J3_4V4A_037No text annotation
J3_4V4A_023No text annotation
J4_4V4A_001No text annotation
J4_4V4A_002No text annotation
J4_4V4A_003No text annotation
J4_4V4A_013No text annotation
J4_4V4A_004No text annotation
J4_4V4A_005No text annotation
J4_4V4A_014No text annotation
J4_4V4A_006No text annotation
J4_4V4A_007No text annotation
J4_4V4A_015No text annotation
J4_4V4A_008No text annotation
J4_4V4A_009No text annotation
J4_4V4A_010No text annotation
J4_4V4A_011No text annotation
J4_4V4A_012No text annotation
J5_4V4A_001No text annotation
J5_4V4A_002No text annotation
J5_4V4A_003No text annotation
J5_4V4A_004No text annotation
J5_4V4A_005No text annotation
J5_4V4A_006No text annotation
J6_4V4A_001No text annotation
J6_4V4A_002No text annotation
J7_4V4A_002No text annotation
J7_4V4A_001No text annotation
J11_4V4A_002No text annotation
J11_4V4A_001No text annotation

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