HL_4V4A_047

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

CGGGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_047 not in the Motif Atlas

Homologous match to HL_4WF9_016

Geometric discrepancy: 0.148

The information below is about HL_4WF9_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V4A|1|B0|C|498
4V4A|1|B0|G|499
4V4A|1|B0|G|500
4V4A|1|B0|G|501
4V4A|1|B0|A|502
4V4A|1|B0|G|503

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BQ

50S ribosomal protein L22