HL_4V4A_069

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GAAAAUC

Length

7 nucleotides

Bulged bases

4V4A|1|B0|A|1509, 4V4A|1|B0|U|1513

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_069 not in the Motif Atlas

Geometric match to HL_7A0S_037

Geometric discrepancy: 0.3448

The information below is about HL_7A0S_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39243.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V4A|1|B0|G|1508
4V4A|1|B0|A|1509
4V4A|1|B0|A|1510
4V4A|1|B0|A|1511
4V4A|1|B0|A|1512
4V4A|1|B0|U|1513
4V4A|1|B0|C|1514

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BA

50S ribosomal protein L2