HL_4V4A_081

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

AAAUCACU

Length

8 nucleotides

Bulged bases

4V4A|1|B0|A|2190, 4V4A|1|B0|A|2191

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_081 not in the Motif Atlas

Geometric match to HL_4WF9_009

Geometric discrepancy: 0.3749

The information below is about HL_4WF9_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

4V4A|1|B0|A|2189
4V4A|1|B0|A|2190
4V4A|1|B0|A|2191
4V4A|1|B0|U|2192
4V4A|1|B0|C|2193
4V4A|1|B0|A|2194
4V4A|1|B0|C|2195
4V4A|1|B0|U|2196

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BY

50S ribosomal protein L31