HL_4V4A_087

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4A_087 not in the Motif Atlas

Homologous match to HL_4WF9_054

Geometric discrepancy: 0.2343

The information below is about HL_4WF9_054

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

4V4A|1|B0|G|2353
4V4A|1|B0|G|2354
4V4A|1|B0|A|2355
4V4A|1|B0|A|2356
4V4A|1|B0|A|2357
4V4A|1|B0|C|2358

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain BM

50S ribosomal protein L18