3D structure

PDB id
4V4A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
9.5 Å

Loop

Sequence
CUGUUCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V4A_091 not in the Motif Atlas
Homologous match to HL_4WF9_058
Geometric discrepancy: 0.2309
The information below is about HL_4WF9_058
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_48677.1
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
22

Unit IDs

4V4A|1|B0|C|2530
4V4A|1|B0|U|2531
4V4A|1|B0|G|2532
4V4A|1|B0|U|2533
4V4A|1|B0|U|2534
4V4A|1|B0|C|2535
4V4A|1|B0|G|2536

Current chains

Chain B0
23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:


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