HL_4V4G_228
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- CGGAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4G_228 not in the Motif Atlas
- Homologous match to HL_5J7L_031
- Geometric discrepancy: 0.3302
- The information below is about HL_5J7L_031
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
4V4G|1|EA|C|1515
4V4G|1|EA|G|1516
4V4G|1|EA|G|1517
4V4G|1|EA|A|1518
4V4G|1|EA|A|1519
4V4G|1|EA|G|1520
Current chains
- Chain EA
- 16S ribosomal RNA
Nearby chains
- Chain FB
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: