HL_4V4I_015
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GUGAAAGCC
- Length
- 9 nucleotides
- Bulged bases
- 4V4I|1|w|G|329, 4V4I|1|w|A|330, 4V4I|1|w|A|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4I_015 not in the Motif Atlas
- Homologous match to HL_7RQB_012
- Geometric discrepancy: 0.4966
- The information below is about HL_7RQB_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_08002.9
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 19
Unit IDs
4V4I|1|w|G|327
4V4I|1|w|U|328
4V4I|1|w|G|329
4V4I|1|w|A|330
4V4I|1|w|A|331
4V4I|1|w|A|332
4V4I|1|w|G|333
4V4I|1|w|C|334
4V4I|1|w|C|335
Current chains
- Chain w
- 23S LARGE SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain D
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L24
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