HL_4V4I_032

3D structure

PDB id

4V4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

UUAGAAGCA

Length

9 nucleotides

Bulged bases

4V4I|1|w|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4I_032 not in the Motif Atlas

Geometric match to HL_4V9F_036

Geometric discrepancy: 0.2909

The information below is about HL_4V9F_036

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4V4I|1|w|U|1065
4V4I|1|w|U|1066
4V4I|1|w|A|1067
4V4I|1|w|G|1068
4V4I|1|w|A|1069
4V4I|1|w|A|1070
4V4I|1|w|G|1071
4V4I|1|w|C|1072
4V4I|1|w|A|1073

Current chains

Chain w

23S LARGE SUBUNIT RIBOSOMAL RNA

Nearby chains