3D structure

PDB id
4V4I (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
Experimental method
X-RAY DIFFRACTION
Resolution
3.71 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases
4V4I|1|w|U|1094
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V4I_033 not in the Motif Atlas
Homologous match to HL_7RQB_030
Geometric discrepancy: 0.3427
The information below is about HL_7RQB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V4I|1|w|C|1092
4V4I|1|w|G|1093
4V4I|1|w|U|1094
4V4I|1|w|A|1095
4V4I|1|w|A|1096
4V4I|1|w|U|1097
4V4I|1|w|A|1098
4V4I|1|w|G|1099

Current chains

Chain w
23S LARGE SUBUNIT RIBOSOMAL RNA

Nearby chains

Chain F
50S ribosomal protein L6

Coloring options:


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