HL_4V4I_042

3D structure

PDB id

4V4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

CGUACG

Length

6 nucleotides

Bulged bases

4V4I|1|w|U|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4I_042 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.3583

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V4I|1|w|C|1533
4V4I|1|w|G|1534
4V4I|1|w|U|1535
4V4I|1|w|A|1536
4V4I|1|w|C|1537
4V4I|1|w|G|1538

Current chains

Chain w

23S LARGE SUBUNIT RIBOSOMAL RNA

Nearby chains