HL_4V4I_072
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GAAGACGAC
- Length
- 9 nucleotides
- Bulged bases
- 4V4I|1|w|A|2820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4I_072 not in the Motif Atlas
- Homologous match to HL_4WF9_064
- Geometric discrepancy: 0.3967
- The information below is about HL_4WF9_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64690.6
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
4V4I|1|w|G|2819
4V4I|1|w|A|2820
4V4I|1|w|A|2821
4V4I|1|w|G|2822
4V4I|1|w|A|2823
4V4I|1|w|C|2824
4V4I|1|w|G|2825
4V4I|1|w|A|2826
4V4I|1|w|C|2827
Current chains
- Chain w
- 23S LARGE SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain L
- 50S ribosomal protein L17
- Chain N
- 50S ribosomal protein L19
- Chain Y
- 50S ribosomal protein L32
Coloring options: