HL_4V4I_110
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- 4V4I|1|z|A|38
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4I_110 not in the Motif Atlas
- Homologous match to HL_1B23_002
- Geometric discrepancy: 0.3585
- The information below is about HL_1B23_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4I|1|z|G|30
4V4I|1|z|A|31
4V4I|1|z|PSU|32
4V4I|1|z|U|33
4V4I|1|z|G|34
4V4I|1|z|A|35
4V4I|1|z|A|36
4V4I|1|z|MIA|37
4V4I|1|z|A|38
4V4I|1|z|PSU|39
4V4I|1|z|C|40
Current chains
- Chain z
- P-site PHE-tRNA
Nearby chains
- Chain 0
- Transfer RNA; tRNA
- Chain 1
- MRNA
- Chain j
- 30S ribosomal protein S9
- Chain n
- 30S ribosomal protein S13
- Chain y
- Small subunit ribosomal RNA; SSU rRNA
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