HL_4V4P_004

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

CGGCGGGAACGACCG

Length

15 nucleotides

Bulged bases

4V4P|1|AA|A|140, 4V4P|1|AA|A|141, 4V4P|1|AA|A|142|||A

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|C|134
4V4P|1|AA|G|135
4V4P|1|AA|G|136
4V4P|1|AA|C|137
4V4P|1|AA|G|137|||A
4V4P|1|AA|G|138
4V4P|1|AA|G|139
4V4P|1|AA|A|140
4V4P|1|AA|A|141
4V4P|1|AA|C|141|||A
4V4P|1|AA|G|142
4V4P|1|AA|A|142|||A
4V4P|1|AA|C|143
4V4P|1|AA|C|144
4V4P|1|AA|G|145

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AM

50S ribosomal protein L13

Chain AT

50S ribosomal protein L23

Chain AW

50S ribosomal protein L29