HL_4V4P_018

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GAGUGAGAC

Length

9 nucleotides

Bulged bases

4V4P|1|AA|A|712|||A

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|G|712
4V4P|1|AA|A|712|||A
4V4P|1|AA|G|713
4V4P|1|AA|U|714
4V4P|1|AA|G|715
4V4P|1|AA|A|716
4V4P|1|AA|G|717
4V4P|1|AA|A|718
4V4P|1|AA|C|719

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A0

50S ribosomal protein L17

Chain BA

Small subunit ribosomal RNA; SSU rRNA

Chain BR

30S ribosomal protein S15

Chain BT

30S ribosomal protein S17