HL_4V4P_021

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

4V4P|1|AA|U|827, 4V4P|1|AA|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4P_021 not in the Motif Atlas

Homologous match to HL_7A0S_024

Geometric discrepancy: 0.3217

The information below is about HL_7A0S_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

4V4P|1|AA|U|826
4V4P|1|AA|U|827
4V4P|1|AA|U|828
4V4P|1|AA|A|829
4V4P|1|AA|G|830
4V4P|1|AA|G|831

Current chains

Chain AA

23S ribosomal RNA

Nearby chains